AffineAlignObjMedium-class: An S4 object for class AffineAlignObjMedium. It only contains...

Description Author(s) See Also


s is a point-wise similarity matrix between signalA and signalB. path matrix is a binary matrix with ones indicating path of maximum cumulative score. GapOpen and GapExten are gap-opening and gap-extension penalties used by affine alignment algorithm. indexA_aligned and indexB_aligned are aligned indices of signalA and SignalB. The cumulative alignment score is in score vector.


Shubham Gupta,

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2019-12-14

See Also


DIAlignR documentation built on Nov. 8, 2020, 8:22 p.m.