getRefRun: Fetch the reference run for each precursor

In DIAlignR: Dynamic Programming Based Alignment of MS2 Chromatograms

Description

Provides the reference run based on lowest m-score.

Usage

getRefRun(multipeptide)

Arguments

multipeptide

(list of data-frames) Each element of the list is collection of features associated with a precursor.

Value

(dataframe) has two columns:

transition_group_id	(integer) a unique id for each precursor.
run	(string) run identifier.

Author(s)

Shubham Gupta, [e-mail]

ORCID: 0000-0003-3500-8152

License: (c) Author (2020) + GPL-3 Date: 2020-04-08

See Also

getMultipeptide

Examples

dataPath <- system.file("extdata", package = "DIAlignR")
## Not run: 
data("multipeptide_DIAlignR", package = "DIAlignR")
getRefRun(multipeptide_DIAlignR)

## End(Not run)

DIAlignR documentation built on Nov. 8, 2020, 8:22 p.m.