writeBED-method: writeBED method

In DMCHMM: Differentially Methylated CpG using Hidden Markov Model

Description

write BS-Seq data to BED files

Usage

writeBED(object, name, file)

## S4 method for signature 'BSData,character,character'
writeBED(object, name, file)

## S4 method for signature 'BSData,character,missing'
writeBED(object, name)

## S4 method for signature 'BSData,missing,character'
writeBED(object, file)

## S4 method for signature 'BSData,missing,missing'
writeBED(object)

## S4 method for signature 'BSDMCs,character,character'
writeBED(object, name, file)

## S4 method for signature 'BSDMCs,character,missing'
writeBED(object, name)

## S4 method for signature 'BSDMCs,missing,character'
writeBED(object, file)

## S4 method for signature 'BSDMCs,missing,missing'
writeBED(object)

Arguments

object	A BSData-class or BSDMCs-class object
name	A character list
file	A character

Value

BED files

Author(s)

Farhad Shokoohi <[e-mail]>

DMCHMM documentation built on Nov. 8, 2020, 8:20 p.m.