Files in DMCHMM

Differentially Methylated CpG using Hidden Markov Model

NAMESPACE

DESCRIPTION

build/vignette.rds

R/methHMMCMC-method.R R/cBSData-method.R R/AllGenerics.R R/findDMCs-method.R R/cBSDMCs-method.R R/combine-method.R R/methVars-method.R R/DMCHMM-package.R R/methReads-method.R R/qqDMCs-method.R R/methLevels-method.R R/zzz.R R/manhattanDMCs-method.R R/methStates-method.R R/methHMEM-method.R R/AllClasses.R R/readBismark-method.R R/writeBED-method.R R/data.R R/totalReads-method.R vignettes/DMCHMM.Rmd man/methHMMCMC-method.Rd man/methStates-method.Rd man/combine-method.Rd man/methLevels-method.Rd man/cBSData-method.Rd man/methReads-method.Rd man/params.Rd man/DMCHMM-package.Rd man/qqDMCs-method.Rd man/readBismark-method.Rd man/BSDMCs-class.Rd man/findDMCs-method.Rd man/methHMEM-method.Rd man/methVars-method.Rd man/data.Rd man/totalReads-method.Rd man/writeBED-method.Rd man/manhattanDMCs-method.Rd man/cBSDMCs-method.Rd man/BSData-class.Rd tests/testthat.R tests/testthat/test-methHMEM.R inst/NEWS.md

inst/NEWS.html

inst/CITATION

inst/doc/DMCHMM.R inst/doc/DMCHMM.Rmd

inst/doc/DMCHMM.html

inst/extdata/blk.BCU1568_BC_BS_1

inst/extdata/blk.BCU173_TC_BS_1

inst/extdata/blk.BCU551_Mono_BS_1

DMCHMM documentation built on Nov. 8, 2020, 8:20 p.m.