Files in DNAshapeR
High-throughput prediction of DNA shape features

README.md
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
src/properties.h
src/OptionParser.h
src/utilities.cpp
src/common.h
src/Output.cpp
src/prediction.h
src/TableCompiler.h
src/ReadData.h
src/RcppExports.cpp
src/map.cpp
src/utilities.h
src/OptionParser.cpp
src/ShapePrediction.cpp
src/map.h
src/properties.cpp
src/TableCompiler.cpp
src/Output.h
src/ReadData.cpp
src/SNP.h
src/SNP.cpp
src/prediction.cpp
R/getFasta.R R/core.R R/plotShape.R R/RcppExports.R R/getShape.R R/encodeSeqShape.R vignettes/DNAshapeR.Rmd man/normalizeShape.Rd man/normalize.Rd man/plotShape.Rd man/readNonStandardFastaFile.Rd man/encodeNstOrderShape.Rd man/readShape.Rd man/getShape.Rd man/DNAshapeR-package.Rd man/getFasta.Rd man/encodeKMerSeq.Rd man/encodeSeqShape.Rd man/heatShape.Rd man/trackShape.Rd man/encodeKmerHbond.Rd man/convertMethFile.Rd tests/testthat.R tests/testthat/test_read.R
inst/CITATION
inst/doc/DNAshapeR.R
inst/doc/DNAshapeR.html
inst/doc/DNAshapeR.Rmd
inst/extdata/CGRsample_short.fa
inst/extdata/PBMsample_short.fa
inst/extdata/PBMsample.s
inst/extdata/SingleSeqsample.fa.MGW
inst/extdata/PBMsample.fa
inst/extdata/SELEXsample_short.fa
inst/extdata/PBMsample_short.s inst/extdata/SELEXsample_short.s
inst/extdata/CGRsample.fa
inst/extdata/MethylSample.fa
inst/extdata/SELEXsample.s
inst/extdata/MethylSamplePos.fa
inst/extdata/SingleSeqsample.fa
inst/extdata/SELEXsample.fa
DNAshapeR documentation built on Nov. 8, 2020, 8:04 p.m.