Man pages for DNAshapeR
High-throughput prediction of DNA shape features

convertMethFileConvert fasta file to methylated file format
DNAshapeR-packageDNAshapeR package for high-throughput prediction of DNA shape...
encodeKmerHbondencode Hbond
encodeKMerSeqEncode k-mer DNA sequence features
encodeNstOrderShapeEncode n-st order shape features DNAshapeR can be used to...
encodeSeqShapeEncode k-mer DNA sequence and n-th order DNA Shape features
getFastaExtract fasta sequence given a set of genomic intervals and a...
getShapePredict DNA shape from a FASTA file
heatShapePlot heatmap of DNA shape features
normalizeMin-Max normalization
normalizeShapeNormalize n-st order shape features
plotShapePlot metaprofiles of DNA shape features
readNonStandardFastaFileRead the position fasta file
readShapeRead (parse) DNA shape predictions
trackShapePlot track view of DNA shape features
DNAshapeR documentation built on Nov. 8, 2020, 8:04 p.m.