DSS: Dispersion shrinkage for sequencing data

DSS is an R library performing differntial analysis for count-based sequencing data. It detectes differentially expressed genes (DEGs) from RNA-seq, and differentially methylated loci or regions (DML/DMRs) from bisulfite sequencing (BS-seq). The core of DSS is a new dispersion shrinkage method for estimating the dispersion parameter from Gamma-Poisson or Beta-Binomial distributions.

Package details

AuthorHao Wu <hao[email protected]>
Bioconductor views ChIPSeq DNAMethylation DifferentialExpression DifferentialMethylation GeneExpression ImmunoOncology RNASeq Sequencing
MaintainerHao Wu <[email protected]>
LicenseGPL
Version2.30.1
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("DSS")

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DSS documentation built on Jan. 5, 2019, 6:41 p.m.