API for FGNet
Functional Gene Networks derived from biological enrichment analyses
| Global functions | |
|---|---|
| FEA_tools | Man page |
| FGNet | Man page |
| FGNet-package | Man page |
| FGNet_GUI | Man page Source code |
| FGNet_report | Man page |
| GOEvidenceCodes | Man page |
| SOAPQuery | Source code |
| actDeactGenes | Source code |
| addGeneLabels | Source code |
| adjMatrix | Man page |
| analyzeNetwork | Man page Source code |
| buildGeneSets | Source code |
| buildTermsTable | Source code |
| clDescriptions | Source code |
| clustersDistance | Man page Source code |
| clustersTable | Source code |
| createHTML_FEA_header | Source code |
| createHtml | Source code |
| errorMsgDavid | Source code |
| fea2incidMat | Man page Source code |
| fea_david | Man page Source code |
| fea_gage | Man page Source code |
| fea_gtLinker | Man page Source code |
| fea_gtLinker_getResults | Man page Source code |
| fea_topGO | Man page Source code |
| fillCombosColumns | Source code |
| formatResultsFile | Source code |
| formatTerms | Source code |
| format_david | Man page Source code |
| format_gtLinker | Source code |
| format_results | Man page Source code |
| functionalNetwork | Man page Source code |
| generateNetwork | Source code |
| generateReport | Source code |
| getContent | Source code |
| getJobName | Source code |
| getMGTerms | Source code |
| getResults_david | Man page |
| getResults_gtLinker | Man page |
| getTerms | Man page Source code |
| goTreeLinks | Source code |
| groupTypes | Man page |
| intersectionNetwork | Man page |
| keywordsTerm | Man page Source code |
| loadEset | Source code |
| loadFileDialog | Source code |
| loadInstPkg | Source code |
| newDavidVars | Source code |
| organisms | Man page |
| plotFGNet | Source code |
| plotFGNet_bipartite | Source code |
| plotFGNet_default | Source code |
| plotGoAncestors | Man page Source code |
| plotMetagroupsDistance | Man page |
| plotSubNetwork | Source code |
| processExpressionField | Source code |
| processFile | Source code |
| processGenesField | Source code |
| queryArgsAsCharacter | Source code |
| query_david | Man page |
| query_gtLinker | Man page |
| readFEAresults | Source code |
| readGeneTermSets | Man page Source code |
| refList | Source code |
| report_david | Man page |
| report_gtLinker | Man page |
| selectAPI | Source code |
| selectLoadGs | Source code |
| selectNetworkTool | Source code |
| selectNetworkType | Source code |
| selectNewGs | Source code |
| selectWs | Source code |
| selectWs_fillFields | Source code |
| setColors | Source code |
| showVignette | Source code |
| submitQuery | Source code |
| syncTermDescCombos | Source code |
| tabDavid_fill | Source code |
| tabFEA_fill | Source code |
| tabGTL_fill | Source code |
| tabGage_fill | Source code |
| tabHelp_fill | Source code |
| tabNetwork_common_fill | Source code |
| tabNetwork_fill | Source code |
| tabOther_fill | Source code |
| tabPlotNetwork_fill | Source code |
| tabReport_fill | Source code |
| tabSubNetwork_fill | Source code |
| tabTopGo_fill | Source code |
| toMatrix | Man page |
| viewFile | Source code |
