sampsInVCF: enumerate samples available in a VCF file
In GGtools: software and data for analyses in genetics of gene expression
Description
Usage
Arguments
Value
Note
Examples
Description
enumerate samples available in a VCF file
Usage
1
sampsInVCF(tf)
Arguments
tf
instance of TabixFile referring
to a tabix-indexed VCF
Value
vector of available sample identifiers
Note
This package exports TabixFile for the sake of the example below.
Examples
1
2
tf = TabixFile(system.file("vcf/CEU.exon.2010_09.genotypes.vcf.gz", package="GGtools"))
sampsInVCF(tf)
GGtools documentation built on Nov. 8, 2020, 6:32 p.m.
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Description Usage Arguments Value Note Examples
Description
enumerate samples available in a VCF file
Usage
1 | sampsInVCF(tf)
|
Arguments
tf |
instance of |
Value
vector of available sample identifiers
Note
This package exports TabixFile for the sake of the example below.
Examples
1 2 | tf = TabixFile(system.file("vcf/CEU.exon.2010_09.genotypes.vcf.gz", package="GGtools"))
sampsInVCF(tf)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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