snijders: Public CGH data of Snijders

In GLAD: Gain and Loss Analysis of DNA

Description

The data consist of 15 human cell strains with known karyotype (12 fibroblast cell strains, 2 chorionic villus cell strains, 1 lymploblast cell strain) from the NIGMS Human Genetics Cell Repository (http://locus.umdnj.edu/nigms). Each cell strain has been hybridized onto a CGH-array of 2276 BAC's spotted in triplicate.

Usage

data(snijders)

Source

http://www.nature.com/ng/journal/v29/n3/suppinfo/ng754_S1.html

References

A M Snijders, N Nowak, R Segraves, S Blackwood, N Brown, J Conroy, G Hamilton, A K Hindle, B Huey, K Kimura, S Law, K Myambo, J Palmer, B Ylstra, J P Yue, J W Gray, A N Jain, D Pinkel & D G Albertson , Assembly of microarrays for genome-wide measurement of DNA copy number, Nature Genetics 29, pp 263 - 264 (2001) Brief Communications.

Examples

data(snijders)
array <- gm13330

GLAD documentation built on Nov. 8, 2020, 11:10 p.m.