GateFinder: Projection-based Gating Strategy Optimization for Flow and Mass Cytometry

Given a vector of cluster memberships for a cell population, identifies a sequence of gates (polygon filters on 2D scatter plots) for isolation of that cell type.

Package details

AuthorNima Aghaeepour <>, Erin F. Simonds <>
Bioconductor views CellBiology Clustering FlowCytometry ImmunoOncology
MaintainerNima Aghaeepour <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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GateFinder documentation built on Nov. 8, 2020, 7:53 p.m.