MC2_Methods: List of level 2 multiple-concentration correction functions
In GladiaTOX: R Package for Processing High Content Screening data

Description Usage Details Value Available Methods Note See Also

mc2_mthds returns a list of correction/transformation functions to be used during level 2 multiple-concentration processing.

1	mc2_mthds()

The functions contained in the list returned by mc2_mthds return a list of expressions to be executed in the mc2 (not exported) function environment. The functions are described here for reference purposes, The mc2_mthds function is not exported, nor is it intended for use.

All available methods are described in the Available Methods section, listed by the function/method name.

A list functions

More information about the level 2 multiple-concentration processing is available in the package vignette, "Pipeline_Overview."

log2: Take the logarithm of cval with the base 2.
log10: Take the logarithm of cval with the base 10.
rmneg: Remove entries where cval is less than 0.
rmzero: Remove entries where cval is 0.
mult25: Multiply cval by 25.
mult100: Multiply cval by 100.
negshift: Shift cval by subtracting out the minimum of cval and adding 1, such that the new minimum of cval is 1.
mult25: Multiply cval by 2.5.
mult3: Multiply cval by 3.
mult6: Multiply cval by 6.