Man pages for GmicR
Combines WGCNA and xCell readouts with bayesian network learrning to generate a Gene-Module Immune-Cell network (GMIC)
| Auto_WGCNA | Carries out WGCNA with default settings or custom settings |
| Batch_Net | Generates a subgraph from query nodes |
| bn_tabu_gen | Uses tabu search algorithm to learn the structure of... |
| Data_Prep | Discretizes biological assay data in preparation for... |
| Gmic_viz | Visualized network |
| GO_Module_NameR | GO enrichment for module names |
| GSEAGO_Builder | GO enrichment for module names |
| InverseARCs | Identifies arcs between nodes with inverse relationships |
| Query_Prep | Query Prep |
| xCell_loader | Scales and centers data by sample/row in preparation for... |
