Files in GmicR

Combines WGCNA and xCell readouts with bayesian network learrning to generate a Gene-Module Immune-Cell network (GMIC)

README.md

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

R/Auto_WGCNA.R R/Module_annotation.R R/bn_tabu_gen_1.R R/GmicR_viz.R vignettes/GmicR_vignette.Rmd man/Batch_Net.Rd man/xCell_loader.Rd man/Data_Prep.Rd man/bn_tabu_gen.Rd man/GO_Module_NameR.Rd man/InverseARCs.Rd man/Query_Prep.Rd man/GSEAGO_Builder.Rd man/Gmic_viz.Rd man/Auto_WGCNA.Rd inst/doc/GmicR_vignette.Rmd inst/doc/GmicR_vignette.R

inst/doc/GmicR_vignette.html

inst/extdata/GMIC_Builder_disc.Rdata

inst/extdata/GMIC_Final.Rdata

inst/extdata/DLBCL_xCell_sig.txt

inst/extdata/sample_dat.Rdata

inst/extdata/IRIS_xCell_sig.txt

inst/extdata/example_shiny3.png

inst/extdata/GMIC_net.Rdata

inst/extdata/xCell_email.png

inst/extdata/example_shiny1.png

inst/extdata/GMIC_Builder.Rdata

inst/extdata/example_shiny2.png

GmicR documentation built on Nov. 8, 2020, 7:07 p.m.