Man pages for GmicR
Combines WGCNA and xCell readouts with bayesian network learrning to generate a Gene-Module Immune-Cell network (GMIC)

Auto_WGCNACarries out WGCNA with default settings or custom settings
Batch_NetGenerates a subgraph from query nodes
bn_tabu_genUses tabu search algorithm to learn the structure of...
Data_PrepDiscretizes biological assay data in preparation for...
Gmic_vizVisualized network
GO_Module_NameRGO enrichment for module names
GSEAGO_BuilderGO enrichment for module names
InverseARCsIdentifies arcs between nodes with inverse relationships
Query_PrepQuery Prep
xCell_loaderScales and centers data by sample/row in preparation for...
GmicR documentation built on Feb. 16, 2020, 2 a.m.