grenander.ebp: Grenander EBP.

Description Usage Arguments Value Author(s) References Examples

View source: R/grenander.ebp.R

Description

computes Grenander EBP

Usage

1

Arguments

p

is a vector of p-values.

Value

pval.pdf

vector of Grenander PDF estimates corresponding to the input vector of p-values

ebp.null

vector of Grenander EBP estimates corresponding to the input vector of p-values

Author(s)

Stan Pounds <stanley.pounds@stjude.org>; Demba Fofana <demba.fofana@stjude.org>

References

Langaas, M., Lindqvist, B., 2005. Estimating the proportion of true null hypotheses, with application to DNA microarray data. J.R. Statist. Soc. B67, part4, 555-572. Strimmer, K. 2008. A unified approach to false discovery rate estimation. BMC Bioinformatics 9: 303. Strimmer, K. 2008. fdrtool: a versatile R package for estimating local and tail area-based false discovery rates. Bioinformatics 24: 1461-1462.

Examples

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####################Grenander estimation #####################
# load data  and compute grenander
p<-rbeta(1000,0.8,1) # Grenander example p-values
gren.res<-grenander.ebp(p) # Compute grenander results

HybridMTest documentation built on Nov. 8, 2020, 8:29 p.m.