regions_example: Example of regions

Description Usage Format Value Examples

Description

Example of regions used to illustrate usage of "IWTomicsData" object constructor. It contains four different region datasets: "elem1", "elem2", "elem3" and "control".

Usage

1

Format

A "GRangesList" object with genomic regions of each region dataset: "elem1", "elem2", "elem3" and "control".

Value

"GRangesList" object.

Examples

1

Example output

Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colMeans, colSums, colnames, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int,
    pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply,
    setdiff, sort, table, tapply, union, unique, unsplit, which,
    which.max, which.min

Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following object is masked from 'package:base':

    expand.grid

Loading required package: IRanges
Loading required package: GenomeInfoDb

Attaching package: 'IWTomics'

The following object is masked from 'package:stats':

    smooth

IWTomics documentation built on Nov. 1, 2018, 2:21 a.m.