Files in ImpulseDE2

Differential expression analysis of longitudinal count data sets

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

R/srcImpulseDE2_fitImpulse.R R/srcImpulseDE2_runDEAnalysis.R R/srcImpulseDE2_classImpulseDE2Object.R R/srcImpulseDE2_runDESeq2.R R/srcImpulseDE2_evalSigmoid.R R/srcImpulseDE2_plotHeatmap.R R/srcImpulseDE2_processData.R R/srcImpulseDE2_evalImpulse.R R/srcImpulseDE2_plotGenes.R R/srcImpulseDE2_fitSigmoid.R R/srcImpulseDE2_simulateDataSet.R R/ImpulseDE2_main.R R/srcImpulseDE2_CostFunctionsFit.R R/srcImpulseDE2_computeNormConst.R vignettes/ImpulseDE2_Tutorial.Rmd man/fitSigmoidModels.Rd man/simulateDataSetImpulseDE2.Rd man/runDEAnalysis.Rd man/runImpulseDE2.Rd man/fitImpulseModel.Rd man/computeNormConst.Rd man/plotHeatmap.Rd man/fitConstImpulseGene.Rd man/plotGenes.Rd man/computeSizeFactors.Rd man/runDESeq2.Rd man/get_accessors.Rd man/fitConstImpulse.Rd man/evalImpulse_comp.Rd man/fitSigmoidGene.Rd man/ImpulseDE2Object-class.Rd man/evalLogLikSigmoid_comp.Rd man/fitSigmoidModel.Rd man/evalSigmoid_comp.Rd man/evalLogLikImpulse_comp.Rd man/evalImpulse.Rd man/list_accession.Rd man/evalLogLikImpulse.Rd man/estimateImpulseParam.Rd man/writeReportToFile.Rd man/updateDEAnalysis.Rd man/evalLogLikMu_comp.Rd man/evalSigmoid.Rd man/estimateSigmoidParam.Rd man/evalLogLikSigmoid.Rd man/evalLogLikMu.Rd man/append_strReport.Rd man/fitConstModel.Rd man/processData.Rd man/set_accessors.Rd man/fitModels.Rd

inst/NEWS

inst/doc/ImpulseDE2_Tutorial.Rmd inst/doc/ImpulseDE2_Tutorial.R

inst/doc/ImpulseDE2_Tutorial.html

ImpulseDE2 documentation built on April 28, 2020, 9:19 p.m.