download_KEGGfile: download_KEGGfile
In KEGGprofile: An annotation and visualization package for multi-types and multi-groups expression data in KEGG pathway

The function download XML files and png files from KEGG website to local disk

1 2	download_KEGGfile(pathway_id = "00010", species = "hsa", target_dir = getwd())

`pathway_id`	the KEGG pathway id, such as '00010'
`species`	the species id in KEGG database, 'hsa' means human, 'mmu' means mouse, 'rno' means rat, etc
`target_dir`	the local directory where the downloaded files are saved

If pathway_id is set as 'all', all KEGG pathway ids in KEGG.db package will be used and downloaded from KEGG website

1	download_KEGGfile(pathway_id="00010",species='hsa')

KEGGprofile documentation built on Nov. 8, 2020, 6:13 p.m.

KEGGprofile index

Package overview README.md KEGGprofile: Application Examples

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