download_latest_pathway: download_latest_pathway
In KEGGprofile: An annotation and visualization package for multi-types and multi-groups expression data in KEGG pathway
Description
Usage
Arguments
Details
Value
Examples
View source: R/KEGG_function.R
Description
The function will downlaod the latest pathway gene link from KEGG website.
Usage
1
download_latest_pathway(species)
Arguments
species
the species id in KEGG database, 'hsa' means human, 'mmu' means mouse, 'rno' means rat, etc
Details
The function will downlaod the latest pathway gene link from KEGG website.
Value
a list with two parts
name keggpathway2gene
description a list with the genes for each pathway
name pathway2name
description a list with the names for each pathway
Examples
1
## Not run: download_latest_pathway(species="hsa")
KEGGprofile documentation built on Nov. 8, 2020, 6:13 p.m.
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Description Usage Arguments Details Value Examples
View source: R/KEGG_function.R
Description
The function will downlaod the latest pathway gene link from KEGG website.
Usage
1 | download_latest_pathway(species)
|
Arguments
species |
the species id in KEGG database, 'hsa' means human, 'mmu' means mouse, 'rno' means rat, etc |
Details
The function will downlaod the latest pathway gene link from KEGG website.
Value
a list with two parts
name keggpathway2gene |
description a list with the genes for each pathway |
name pathway2name |
description a list with the names for each pathway |
Examples
1 | ## Not run: download_latest_pathway(species="hsa")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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