buildRestrictedUniverse: If you want to test for differential enrichment within your...
In LOLA: Locus overlap analysis for enrichment of genomic ranges
Description
Usage
Arguments
Value
Examples
Description
If you want to test for differential enrichment within
your usersets, you can restrict the universe to only
regions that are covered in at least one of your sets.
This function helps you build just such a restricted
universe
Usage
1
Arguments
userSets
The userSets you will pass to the enrichment calculation.
Value
A restricted universe
Examples
1
2
data("sample_input", package="LOLA") # load userSets
restrictedUniverse = buildRestrictedUniverse(userSets)
Example output
LOLA documentation built on Nov. 8, 2020, 8:23 p.m.
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Description Usage Arguments Value Examples
Description
If you want to test for differential enrichment within your usersets, you can restrict the universe to only regions that are covered in at least one of your sets. This function helps you build just such a restricted universe
Usage
1 |
Arguments
userSets |
The userSets you will pass to the enrichment calculation. |
Value
A restricted universe
Examples
1 2 | data("sample_input", package="LOLA") # load userSets
restrictedUniverse = buildRestrictedUniverse(userSets)
|
Example output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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