LOLA: Locus overlap analysis for enrichment of genomic ranges

Provides functions for testing overlap of sets of genomic regions with public and custom region set (genomic ranges) databases. This makes it possible to do automated enrichment analysis for genomic region sets, thus facilitating interpretation of functional genomics and epigenomics data.

README.md Choosing a LOLA Universe Getting Started with LOLA Using LOLA Core

Vignettes Man pages API and functions Files

Package details
Author	Nathan Sheffield <http://www.databio.org> [aut, cre], Christoph Bock [ctb]
Bioconductor views	ChIPSeq FunctionalGenomics GeneRegulation GeneSetEnrichment GenomeAnnotation MethylSeq Sequencing SystemsBiology
Maintainer	Nathan Sheffield <nathan@code.databio.org>
License	GPL-3
Version	1.20.0
URL	http://code.databio.org/LOLA
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("LOLA")`