calcNormConst: Compute size factors for a LineagePulse-object
In LineagePulse: Differential expression analysis and model fitting for single-cell RNA-seq data
Description
Usage
Arguments
Value
Author(s)
See Also
View source: R/srcLineagePulse_calcNormConst.R
Description
Either use externally supplied normalisation constants or set these to one.
Usage
1
calcNormConst(objLP, vecNormConstExternal)
Arguments
objLP
(LineagePulse-object)
Object to fit normalization constants on.
vecNormConstExternal
(numeric vector number of cells)
Model scaling factors supplied by user, one per cell.
Value
objLP (LineagePulse-object)
Object with fit normalization constants.
Author(s)
David Sebastian Fischer
See Also
Called by runLineagePulse.
LineagePulse documentation built on Nov. 8, 2020, 7:01 p.m.
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Description Usage Arguments Value Author(s) See Also
View source: R/srcLineagePulse_calcNormConst.R
Description
Either use externally supplied normalisation constants or set these to one.
Usage
1 | calcNormConst(objLP, vecNormConstExternal)
|
Arguments
objLP |
(LineagePulse-object) Object to fit normalization constants on. |
vecNormConstExternal |
(numeric vector number of cells) Model scaling factors supplied by user, one per cell. |
Value
objLP (LineagePulse-object) Object with fit normalization constants.
Author(s)
David Sebastian Fischer
See Also
Called by runLineagePulse.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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