evalLogLikZINB_comp: Compiled function: evalLogLikZINB

Description Usage Arguments Value Author(s) See Also

Description

Pre-compile heavily used functions. Refer to evalLogLikZINB

Usage

1
evalLogLikZINB_comp(vecCounts, vecMu, vecDisp, vecPi, vecidxNotZero, vecidxZero)

Arguments

vecCounts

(count vector number of samples) Observed read counts, not observed are NA.

vecMu

(vector number of samples) Negative binomial mean parameter.

vecDisp

(scalar vector number of samples) Negative binomial dispersion parameters.

vecPi

(probability vector number of samples) Drop-out rate estimates.

vecidxNotZero

(bool vector number of samples) Whether observation is larger than zero.

vecidxZero

(bool vector number of samples) Whether observation is zero.

Value

scaLogLik (scalar) Likelihood under zero-inflated negative binomial model.

Author(s)

David Sebastian Fischer

See Also

evalLogLikZINB


LineagePulse documentation built on Nov. 8, 2020, 7:01 p.m.