README.md

In MADSEQ: Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data

MADSEQ

MADSEQ-R package for mosaic aneuploidy detection

GitHub page: http://ykong2.github.io/MADSEQ/

Quick Start

Dependencies

• R (latest version recommended)
• JAGS
• R package: rjags, or visit their GitHub

Install

if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("MADSEQ")

Install from GitHub

library(devtools)
install_github("ykong2/MADSEQ", build_vignettes=TRUE)

Install from from tarball

install.packages("directory_to_the_downloaded_package/file_name_MADSEQ.tar.gz")

User Guide

Please follow the instruction of the documentation

Other

For more information, please check our page for MADSEQ

MADSEQ documentation built on Nov. 8, 2020, 6:51 p.m.