plotMixture: density plot for the posterior distribution of alternative...
In MADSEQ: Mosaic Aneuploidy Detection and Quantification using Massive Parallel Sequencing Data
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
density plot presents the posterior distribution of alternative allele
frequency (AAF) estimated from selected model
Usage
1
2
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4
plotMixture(object)
## S4 method for signature 'MadSeq'
plotMixture(object)
Arguments
object
A MadSeq object returned by
runMadSeq function.
Value
density plot for the posterior distribution of AAF
Author(s)
Yu Kong
Yu Kong
See Also
runMadSeq, plotMadSeq,
plotFraction
Examples
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3
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5
## load the example MadSeq object come with the package
data("aneuploidy_chr18")
## plot the distribution of estimated AAF
plotMixture(aneuploidy_chr18)
MADSEQ documentation built on Nov. 8, 2020, 6:51 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
density plot presents the posterior distribution of alternative allele frequency (AAF) estimated from selected model
Usage
1 2 3 4 | plotMixture(object)
## S4 method for signature 'MadSeq'
plotMixture(object)
|
Arguments
object |
A |
Value
density plot for the posterior distribution of AAF
Author(s)
Yu Kong
Yu Kong
See Also
runMadSeq, plotMadSeq,
plotFraction
Examples
1 2 3 4 5 | ## load the example MadSeq object come with the package
data("aneuploidy_chr18")
## plot the distribution of estimated AAF
plotMixture(aneuploidy_chr18)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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