Files in MAIT

Statistical Analysis of Metabolomic Data

R/featureSigID.R R/classNum.R R/peakAggregation.R R/metaboliteTable.R R/sampleProcessing.R R/classifRatioClasses.R R/pcaModel.R R/selectPLScomp.R R/pcaLoadings.R R/spectralSigFeatures.R R/featureInfo.R R/Biotransformations.R R/show-methods.R R/getScoresTable.R R/LSDResults.R R/featureID.R R/plsScores.R R/AllGenerics.R R/spectralFUN.R R/peakAnnotation.R R/plsModel.R R/ovClassifRatioData.R R/parameters.R R/method.R R/classes.R R/selectK.R R/SearchCand.R R/spectralWelch.R R/PLSDA.R R/writeExcelTable.R R/writeParameterTable.R R/plsLoadings.R R/scores-methods.R R/computeSpectra.R R/removeOnePeakSpectra.R R/pcaScores.R R/plotHeatmap.R R/plotBoxplot.R R/resultsPath.R R/ovClassifRatioTable.R R/FisherLSD.R R/identifyMetabolites.R R/spectralTStudent.R R/model-methods.R R/spectralAnova.R R/summary-methods.R R/AllClasses.R R/plotPCA.R R/getPeaklist-methods.R R/pvalues.R R/MAITbuilder.R R/Validation.R R/project.R R/rawData.R R/sigPeaksTable.R R/models.R R/loadings-methods.R R/pvaluesCorrection.R R/plotPLS.R R/spectralWilcox.R R/successRatio.R R/spectralKruskal.R vignettes/MAIT_workflow.pdf man/models.Rd man/Validation.Rd man/Biotransformations.Rd man/plsLoadings.Rd man/MAIT.PhenoData-class.Rd man/MAIT.Parameters-class.Rd man/metaboliteTable.Rd man/featureID.Rd man/MAIT.FeatureData-class.Rd man/inBetween.Rd man/scores.Rd man/resultsPath.Rd man/pcaLoadings.Rd man/successRatio.Rd man/spectralWilcox.Rd man/posAdducts.Rd man/MAIT.RawData-class.Rd man/plsModel.Rd man/selectK.Rd man/plotHeatmap.Rd man/model.Rd man/project.Rd man/plotPCA.Rd man/MAIT.Validation-class.Rd man/selectPLScomp.Rd man/spectralWelch.Rd man/SearchCand.Rd man/plotPLS.Rd man/FisherLSD.Rd man/identifyMetabolites.Rd man/rawData.Rd man/negAdducts.Rd man/plsScores.Rd man/MAIT_dataSet.Rd man/pvalues.Rd man/ovClassifRatio.Rd man/loadings.Rd man/method.Rd man/featureSigID.Rd man/classes.Rd man/featureInfo.Rd man/pcaModel.Rd man/spectralTStudent.Rd man/classifRatioClasses.Rd man/MAIT.FeatureInfo-class.Rd man/writeParameterTable.Rd man/MAIT-class.Rd man/biotransformationsTable.Rd man/MAITbuilder.Rd man/spectralSigFeatures.Rd man/PCAplot3d.Rd man/writeExcelTable.Rd man/LSDResults.Rd man/retrieveSpectrum.Rd man/annotateBiotransf.Rd man/sigPeaksTable.Rd man/spectralAnova.Rd man/peakAggregation.Rd man/PLSDA.Rd man/getScoresTable.Rd man/pvaluesCorrection.Rd man/removeOnePeakSpectra.Rd man/pcaScores.Rd man/parameters.Rd man/plotBoxplot.Rd man/peakAnnotation.Rd man/sampleProcessing.Rd man/Database.Rd man/spectralFUN.Rd man/classNum.Rd man/spectralKruskal.Rd man/ovClassifRatioTable.Rd inst/doc/MAIT_Vignette.pdf inst/doc/MAIT_Vignette.R