MIMOSA: Mixture Models for Single-Cell Assays

Modeling count data using Dirichlet-multinomial and beta-binomial mixtures with applications to single-cell assays.

AuthorGreg Finak <gfinak@fhcrc.org>
Date of publicationNone
MaintainerGreg Finak <gfinak@fhcrc.org>
LicenseArtistic-2.0
Version1.12.0

View on Bioconductor

Files in this package

MIMOSA/.travis.yml
MIMOSA/DESCRIPTION
MIMOSA/MIMOSA-Ex.pdf
MIMOSA/NAMESPACE
MIMOSA/NEWS
MIMOSA/R
MIMOSA/R/AllClasses.R MIMOSA/R/BetaMix.R MIMOSA/R/CompleteDataLL.R MIMOSA/R/MIMOSA.R MIMOSA/R/MarginalGT.R MIMOSA/R/MarginalNE.R MIMOSA/R/MarginalNULL.R MIMOSA/R/MonteCarlo.R MIMOSA/R/MultinomialDirichlet.R MIMOSA/R/betaintegral.R MIMOSA/R/constrained.R MIMOSA/R/contourPlot.R MIMOSA/R/gibbsPsPu.R MIMOSA/R/helperMethods.R MIMOSA/R/initBetaMix.R MIMOSA/R/likelihoodsurface.R MIMOSA/R/posteriorSample.R
MIMOSA/README.html
MIMOSA/README.md
MIMOSA/build
MIMOSA/build/vignette.rds
MIMOSA/data
MIMOSA/data/ICS.rda
MIMOSA/incubator
MIMOSA/incubator/server.R
MIMOSA/incubator/ui.R
MIMOSA/inst
MIMOSA/inst/CITATION
MIMOSA/inst/NEWS
MIMOSA/inst/doc
MIMOSA/inst/doc/MIMOSA.R
MIMOSA/inst/doc/MIMOSA.Rnw
MIMOSA/inst/doc/MIMOSA.pdf
MIMOSA/man
MIMOSA/man/BetaMixResult-class.Rd MIMOSA/man/ConstructMIMOSAExpressionSet.Rd MIMOSA/man/ICS.Rd MIMOSA/man/MDMix.Rd MIMOSA/man/MIMOSA-accessors.Rd MIMOSA/man/MIMOSA-package.Rd MIMOSA/man/MIMOSA.Rd MIMOSA/man/MIMOSAExpressionSet.Rd MIMOSA/man/MIMOSAResult-class.Rd MIMOSA/man/MIMOSAResult.Rd MIMOSA/man/asinh_trans.Rd MIMOSA/man/boxplotMIMOSAResultList.Rd MIMOSA/man/combine.MIMOSA.Rd MIMOSA/man/countsTable.Rd MIMOSA/man/fdr.Rd MIMOSA/man/fitMCMC.Rd MIMOSA/man/pData.Rd MIMOSA/man/print.Rd MIMOSA/man/show.Rd MIMOSA/man/volcanoPlot.Rd
MIMOSA/src
MIMOSA/src/BetaMix.cpp
MIMOSA/src/MCMC.cpp
MIMOSA/src/MIMOSA.h
MIMOSA/src/MIMOSA_init.c
MIMOSA/src/Makevars
MIMOSA/src/Makevars.win
MIMOSA/src/betaintegral.c
MIMOSA/src/betaintegralRcpp.cpp
MIMOSA/tests
MIMOSA/tests/test-all.R
MIMOSA/tests/testthat
MIMOSA/tests/testthat/helper-init.R
MIMOSA/tests/testthat/test-MIMOSA.R
MIMOSA/vignettes
MIMOSA/vignettes/MIMOSA-concordance.tex
MIMOSA/vignettes/MIMOSA.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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