Man pages for MassArray
Analytical Tools for MassArray Data

ampliconPredictionAmplicon prediction
analyzeCpGsAnalyze CG methylation
bisConvertBisulphite conversion
calcMethCalculate percent methylation
calcMWCalculate molecular weight
calcPercentAdductCalculate percent salt adducts
calcPercentConversionCalculate percent conversion
combineCombine MassArrayData objects
combine-methodsCombine MassArrayData objects (methods)
convControlConversion control
countCGsCount number of CGs
createWiggleCreate wiggle track
estimatePrimerDimerEstimate Primer Dimers
evaluateSNPsEvaluate SNPs
expandSequenceExpand nucleotide sequence
findCollisionsFind peak collisions
findFragmentsFind fragments
findPeaksFind peaks
identifySNPsIdentify SNPs
importEpiTyperDataImport EpiTyper data (v.1.0)
importEpiTyperData.newImport EpiTyper data (v.1.0.5)
inSilicoFragmentationIn silico fragmentation
isAssayableIs assayable?
MassArrayData-classClass "MassArrayData"
MassArray.example.dataMassArray Data object
MassArrayFragment-classClass "MassArrayFragment"
MassArrayPeak-classClass "MassArrayPeak"
MassArraySpectrum-classClass "MassArraySpectrum"
numCollisionsCount peak collisions
plot.MassArrayDataPlot MassArrayData
positionOperate on positional information
position-methodsOperate on positional information (methods)
revComplementReverse complement
revComplement-methodsReverse complement (methods)
rnaDigestRNA digest
samplesOperate on sample name(s)
samples-methodsOperate on sample name(s) (methods)
sum.MassArraySpectrumSum MassArraySpectrum objects
MassArray documentation built on May 2, 2018, 4:28 a.m.