tool.fdr.empirical: Estimate Empirical False Discovery Rates

Description Usage Arguments Value Author(s) See Also Examples

View source: R/cle.LS.R

Description

tool.fdr.empirical estimates empirical FDR for modules

Usage

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Arguments

p

p-values of modules

f0

pre-defined threshold for FDR

Value

res

data list including the estimated false discovery rates of modules

Author(s)

Ville-Petteri Makinen

See Also

tool.fdr, tool.fdr.bh

Examples

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## let us assume we have a set of pvalues
## and would like to find FDR values:
set.seed(1)
p <- abs(rnorm(10))*1e-2
f = 0.05 ## pre-defined threshold for FDR
FDRs <- tool.fdr.empirical(p, f) 

Mergeomics documentation built on Nov. 8, 2020, 6:58 p.m.