tool.fdr.empirical: Estimate Empirical False Discovery Rates
In Mergeomics: Integrative network analysis of omics data
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
tool.fdr.empirical estimates empirical FDR for modules
Usage
1
tool.fdr.empirical(p, f0)
Arguments
p
p-values of modules
f0
pre-defined threshold for FDR
Value
res
data list including the estimated false discovery rates of
modules
Author(s)
Ville-Petteri Makinen
See Also
Examples
1
2
3
4
5
6
## let us assume we have a set of pvalues
## and would like to find FDR values:
set.seed(1)
p <- abs(rnorm(10))*1e-2
f = 0.05 ## pre-defined threshold for FDR
FDRs <- tool.fdr.empirical(p, f)
Mergeomics documentation built on Nov. 8, 2020, 6:58 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) See Also Examples
Description
tool.fdr.empirical estimates empirical FDR for modules
Usage
1 | tool.fdr.empirical(p, f0)
|
Arguments
p |
p-values of modules |
f0 |
pre-defined threshold for FDR |
Value
res |
data list including the estimated false discovery rates of modules |
Author(s)
Ville-Petteri Makinen
See Also
Examples
1 2 3 4 5 6 | ## let us assume we have a set of pvalues
## and would like to find FDR values:
set.seed(1)
p <- abs(rnorm(10))*1e-2
f = 0.05 ## pre-defined threshold for FDR
FDRs <- tool.fdr.empirical(p, f)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.