MultiAssayExperiment: Create Classes and Functions for Managing Multiple Assays on Sets of Samples

Develop an integrative environment where multiple assays are managed and preprocessed for genomic data analysis.

AuthorMultiAssay SIG
Date of publicationNone
MaintainerMarcel Ramos <mramos09@gmail.com>
LicenseArtistic-2.0
Version1.0.0

View on Bioconductor

Files in this package

MultiAssayExperiment/DESCRIPTION
MultiAssayExperiment/NAMESPACE
MultiAssayExperiment/R
MultiAssayExperiment/R/API.R MultiAssayExperiment/R/ExperimentList-class.R MultiAssayExperiment/R/MultiAssayExperiment-class.R MultiAssayExperiment/R/MultiAssayExperiment-methods.R MultiAssayExperiment/R/MultiAssayExperiment-pkg.R MultiAssayExperiment/R/MultiAssayExperiment.R MultiAssayExperiment/R/PrepMultiAssay.R MultiAssayExperiment/R/RangedRaggedAssay-class.R MultiAssayExperiment/R/assay-methods.R MultiAssayExperiment/R/hasAssay.R MultiAssayExperiment/R/listToMap.R MultiAssayExperiment/R/mapToList.R
MultiAssayExperiment/README.md
MultiAssayExperiment/build
MultiAssayExperiment/build/vignette.rds
MultiAssayExperiment/inst
MultiAssayExperiment/inst/NEWS
MultiAssayExperiment/inst/doc
MultiAssayExperiment/inst/doc/MultiAssayExperiment.R
MultiAssayExperiment/inst/doc/MultiAssayExperiment.Rmd
MultiAssayExperiment/inst/doc/MultiAssayExperiment.html
MultiAssayExperiment/inst/doc/UsingHDF5Array.R
MultiAssayExperiment/inst/doc/UsingHDF5Array.Rmd
MultiAssayExperiment/inst/doc/UsingHDF5Array.html
MultiAssayExperiment/inst/doc/pradMAEO-RTCGAToolbox.R
MultiAssayExperiment/inst/doc/pradMAEO-RTCGAToolbox.Rmd
MultiAssayExperiment/inst/doc/pradMAEO-RTCGAToolbox.html
MultiAssayExperiment/inst/extdata
MultiAssayExperiment/inst/extdata/exMatrix.R
MultiAssayExperiment/inst/extdata/exMatrix.h5
MultiAssayExperiment/inst/scripts
MultiAssayExperiment/inst/scripts/ExperimentList-Ex.R
MultiAssayExperiment/inst/scripts/MultiAssayExperiment-Ex.R
MultiAssayExperiment/inst/scripts/RangedRaggedAssay-Ex.R
MultiAssayExperiment/inst/scripts/getHits-Ex.R
MultiAssayExperiment/inst/scripts/listToMap-Ex.R
MultiAssayExperiment/inst/scripts/sampleMap-Ex.R
MultiAssayExperiment/man
MultiAssayExperiment/man/API.Rd MultiAssayExperiment/man/ExperimentList-class.Rd MultiAssayExperiment/man/ExperimentList.Rd MultiAssayExperiment/man/MultiAssayExperiment-class.Rd MultiAssayExperiment/man/MultiAssayExperiment.Rd MultiAssayExperiment/man/PrepMultiAssay.Rd MultiAssayExperiment/man/RangedRaggedAssay-class.Rd MultiAssayExperiment/man/RangedRaggedAssay.Rd MultiAssayExperiment/man/assay-RangedRaggedAssay-ANY-method.Rd MultiAssayExperiment/man/experiments-set.Rd MultiAssayExperiment/man/experiments.Rd MultiAssayExperiment/man/getHits.Rd MultiAssayExperiment/man/hasAssay.Rd MultiAssayExperiment/man/mapToList.Rd MultiAssayExperiment/man/sampleMap-set.Rd MultiAssayExperiment/man/sampleMap.Rd MultiAssayExperiment/man/subsetByAssay.Rd MultiAssayExperiment/man/subsetByColumn.Rd MultiAssayExperiment/man/subsetByRow.Rd
MultiAssayExperiment/tests
MultiAssayExperiment/tests/testthat
MultiAssayExperiment/tests/testthat.R
MultiAssayExperiment/tests/testthat/test-ExperimentList-class.R
MultiAssayExperiment/tests/testthat/test-MultiAssayExperiment.R
MultiAssayExperiment/tests/testthat/test-colnameOrder.R
MultiAssayExperiment/tests/testthat/test-constructors.R
MultiAssayExperiment/tests/testthat/test-drop.R
MultiAssayExperiment/tests/testthat/test-emptybuilders.R
MultiAssayExperiment/tests/testthat/test-methods.R
MultiAssayExperiment/tests/testthat/test-rowcolnames.R
MultiAssayExperiment/tests/testthat/test-subset.R
MultiAssayExperiment/vignettes
MultiAssayExperiment/vignettes/MultiAssayExperiment.Rmd
MultiAssayExperiment/vignettes/UsingHDF5Array.Rmd
MultiAssayExperiment/vignettes/pradMAEO-RTCGAToolbox.Rmd

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