getReactomeDiagram: Display the enriched Reactome diagram of the given Reactome...
In NoRCE: NoRCE: Noncoding RNA Sets Cis Annotation and Enrichment

Description Usage Arguments Value Examples

Display the enriched Reactome diagram of the given Reactome pathway id. This function is specific to only one pathway id and identifies the enriched genes in the diagram.

1	getReactomeDiagram(mrnaObject, pathway, imageFormat)

`mrnaObject`	Output of enrichment results
`pathway`	Reactome pathway term
`imageFormat`	Image format of the diagram. Possible image formats are 'png', 'svg'

Shows reactome diagram marked with an enriched genes in a browser

br_enr<-reactomeEnrichment(genes = breastmRNA,org_assembly='hg19')

getReactomeDiagram(mrnaObject = br_enr,pathway = br_enr@ID[1],
                   imageFormat = 'png')