shuffledRandomScores: Generates Null-Distribution for List-Overlap-Scores

Description Usage Arguments Value Author(s) See Also

View source: R/compareLists.R

Description

A null-distribution for list-overlap scores is generated via simulation. Scores are computed for random permutations.

Usage

1
shuffledRandomScores(n, nn, bases, B = 1000, two.sided=TRUE)

Arguments

n

the length of the lists.

nn

the maximal ranks to be considered, one entry per weighting parameter alpha.

bases

exp(-alpha) for each weighting parameter alpha.

B

the number of permutations to be drawn.

two.sided

if TRUE both ends of the lists are taken into account, only top ranks are considered otherwise.

Value

Returns an object of type "shuffledRandomScores. Its only data is a matrix of random scores. One column per alpha and one row per permutation is generated.

There are print and plot methods for "shuffledRandomScores objects.

Author(s)

Claudio Lottaz

See Also

compareLists


OrderedList documentation built on Nov. 1, 2018, 2:26 a.m.