NC_Order: Taxa importance ordering by the number of connected taxa
In PERFect: Permutation filtration for microbiome data

Description Usage Arguments Value Author(s) References Examples

Taxa importance ordering by the number of connected taxa

1	NC_Order(Counts)

Counts

OTU COUNTS table, where taxa are columns and samples are rows of the table. It should be a in data frame format with columns corresponding to taxa names.

NC Taxa names in increasing order of the number of connected taxa.

Ekaterina Smirnova

Smirnova, E., Huzurbazar, H., Jafari, F. “PERFect: permutation filtration of microbiome data", to be submitted.

data(mock2)
# Proportion data matrix
Prop <- mock2$Prop

# Counts data matrix
Counts <- mock2$Counts

#arrange counts in order of increasing number of samples taxa are present in
NC <- NC_Order(Counts)