MMvsPS: Module members vs Peptide Significance
In ProCoNA: Protein co-expression network analysis (ProCoNA).

Plots the module membership (correlation to eigenvector) against the peptide significance (correlation to phenotype) for a given trait and module

1	MMvsPS(pnet, pepdat, phenoVec, mod)

`pnet`	The procona network
`pepdat`	the peptide data, with rows as samples and columns as peptides
`phenoVec`	the phenotypic trait, vector
`mod`	the module of interest

returns a list of module memberships and peptide significances.

David L Gibbs

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data(ProCoNA_Data)
#net1 <- buildProconaNetwork("peptide network", peptideData, pow=13)
MMvsPS(net1, peptideData, phenotypes[,5], 1)

ProCoNA documentation built on Nov. 1, 2018, 3:28 a.m.

ProCoNA index

De Novo Peptide Network Example

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