API for QSutils
Quasispecies Diversity

Global functions
AlgnStrandHpls Source code
Collapse Man page Source code
ConsSeq Man page Source code
CorrPos Source code
CorrectGapsAndNs Man page Source code
DBrule Man page Source code
DNA.dist Man page Source code
DSFT Man page Source code
Diverge Man page Source code
DottedAlignment Man page Source code
FAD Man page Source code
FreqMat Man page Source code
GenerateVars Man page Source code
GenotypeStandards_A-H.fas Man page
GetInfProfile Man page Source code
GetQSData Man page Source code
GetRandomSeq Man page Source code
GiniSimpson Man page Source code
GiniSimpsonMVUE Man page Source code
GiniSimpsonVar Man page Source code
HCq Man page Source code
HCqProfile Man page Source code
HCqVar Man page Source code
Hill Man page Source code
HillProfile Man page Source code
InfContent Source code
IntersectStrandHpls Man page Source code
MutationFreq Man page Source code
MutationFreqVar Man page Source code
MutsTbl Man page Source code
NormShannon Man page Source code
NormShannonVar Man page Source code
NucleotideDiversity Man page Source code
PolyDist Man page Source code
QSutils Man page
QSutils-package Man page
Rao Man page Source code
RaoPow Man page Source code
RaoPowProfile Man page Source code
RaoVar Man page Source code
ReadAmplSeqs Man page Source code
Recollapse Man page Source code
Renyi Man page Source code
RenyiProfile Man page Source code
ReportVariants Man page Source code
SegSites Man page Source code
Shannon Man page Source code
ShannonVar Man page Source code
SortByMutations Man page Source code
SummaryMuts Man page Source code
TotalMutations Man page Source code
Toy.GapsAndNs.fna Man page
ToyData_10_50_1000.fna Man page
ToyData_FWReads.fna Man page
ToyData_RVReads.fna Man page
UniqueMutations Man page Source code
Unknown-Genotype.fna Man page
fn.ab Man page Source code
geom.series Man page Source code
geovar Source code
get.nt Source code
mutate Source code Source code
phi Source code
QSutils documentation built on Nov. 1, 2018, 2:18 a.m.