Description Usage Arguments Value Author(s) Examples
Returns the Cytoscape network as a Bioconductor graph.
1 | createGraphFromNetwork(network = NULL, base.url = .defaultBaseUrl)
|
network |
(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape. |
base.url |
(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3. |
A Bioconductor graph object.
Alexander Pico, Tanja Muetze, Georgi Kolishovski, Paul Shannon
1 2 3 | cw <- CytoscapeWindow('network', graph=make_graphnel())
g <- createGraphFromNetwork()
g <- createGraphFromNetwork('myNetwork')
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