Files in REDseq
Analysis of high-throughput sequencing data processed by restriction enzyme digestion
NAMESPACE
DESCRIPTION
build/vignette.rds
data/example.assignedREDseq.rda
data/example.REDseq.rda
data/example.map.rda
R/compareREDseq.R
R/buildREmap.R
R/distanceHistSeq2RE.R
R/binom.test.REDseq.R
R/summarizeBySeq.R
R/summarizeByRE.R
R/searchPattern.R
R/assignSeq2REsite.R
R/plotCutDistribution.R
R/writeHits.R
vignettes/REDseq.Rnw
man/buildREmap.Rd
man/searchPattern.Rd
man/writeHits.Rd
man/REDseq-package.Rd
man/binom.test.REDseq.Rd
man/plotCutDistribution.Rd
man/example.map.Rd
man/example.assignedREDseq.Rd
man/compareREDseq.Rd
man/distanceHistSeq2RE.Rd
man/example.REDseq.Rd
man/assignSeq2REsite.Rd
man/summarizeBySeq.Rd
man/summarizeByRE.Rd
inst/doc/REDseq.Rnw
inst/doc/REDseq.R
inst/doc/REDseq.pdf
inst/extdata/TSS1kbCutFreqAndVariance_mm9.xls
inst/extdata/TSS1kbCutFreqAndVariance_hg19.xls
inst/extdata/examplePattern.fa
inst/extdata/REsitesUnique.fasta
