findReplicates: Find all replicates of a certain siRNA/gene in a dataset
In RNAither: Statistical analysis of high-throughput RNAi screens

Returns which lines in the dataset correspond to a given siRNA/gene ID.

1	findReplicates(dataset, whichCol, replicateID)

`dataset`	an R data frame generated with `generateDatasetFile`
`whichCol`	a character string specifying the name of the column containing the ID, either `Internal_GeneID` or `GeneName`
`replicateID`	the siRNA/gene ID of interest

An integer vector containing the indexes in the main dataset of all wells corresponding to a given siRNA/gene ID

data(exampleHeader, package="RNAither")
data(exampleDataset, package="RNAither")

Indexes <- findReplicates(dataset, "GeneName", "CPSF1")

RNAither documentation built on Nov. 8, 2020, 8:06 p.m.

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