API for RSVSim
RSVSim: an R/Bioconductor package for the simulation of structural variations
| Global functions | |
|---|---|
| .addBreakpointMutations | Source code |
| .adjustPositions | Source code |
| .compareSV | Source code |
| .drawPos | Source code |
| .drawPos_trans | Source code |
| .execDeletion | Source code |
| .execInsertion | Source code |
| .execInversion | Source code |
| .execTandemDuplication | Source code |
| .execTranslocation | Source code |
| .getBpSeq | Source code |
| .getDummyDataframe | Source code |
| .getHG19 | Source code |
| .getOverlap | Source code |
| .getSVSizes | Source code |
| .loadFromBSGenome_TandemRepeats | Source code |
| .loadFromUCSC_RepeatMasks | Source code |
| .loadFromUCSC_SegDups | Source code |
| .readRepeatMaskerOutput | Source code |
| .simInsertionPositions | Source code |
| .simPositions | Source code |
| .simTranslocationPositions | Source code |
| .subtractIntervals | Source code |
| .testSVSim | Source code |
| .validateInput | Source code |
| compareSV | Man page |
| compareSV,character,character-method | Man page |
| compareSV,character,data.frame-method | Man page |
| compareSV,data.frame,data.frame-method | Man page |
| estimateSVSizes | Man page |
| estimateSVSizes,numeric,missing,ANY,ANY,character-method | Man page |
| estimateSVSizes,numeric,missing,ANY,ANY,missing-method | Man page |
| estimateSVSizes,numeric,numeric,ANY,ANY,missing-method | Man page |
| segDups | Man page |
| simulateSV | Man page |
| simulateSV,ANY | Man page |
| simulateSV,ANY-method | Man page |
| weightsMechanisms | Man page |
| weightsRepeats | Man page |
