bait: Extract bait, prey, participant, inhibitor, pubmed,...

Description Usage Arguments Value Author(s) References See Also Examples

Description

The functions return bait/prey UniProt identifier of the given psimi25Interaction object.

Usage

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Arguments

x

An object of psimi25Interaction-class, see example

...

Other parameters to control the identifier returned, not implemented yet

Value

The source database identifier is returned.

Author(s)

Jitao David Zhang <jitao_david.zhang@roche.com>, Tony Chiang <tchiang@ebi.ac.uk>

References

The UniProt database http://www.expasy.uniprot.org/

See Also

psimi25Interaction-class

Examples

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xmlDir <- system.file("/extdata/psi25files",package="RpsiXML")

gridxml <- file.path(xmlDir, "biogrid_200804_test.xml")
gridSet <- parsePsimi25Interaction(gridxml, BIOGRID.PSIMI25)

interExp <- interactions(gridSet)[[1]]
bait(interExp)
prey(interExp)

RpsiXML documentation built on Nov. 8, 2020, 6:02 p.m.