psimi25InteractionEntry-class: Class "psimi25InteractionEntry"
In RpsiXML: R interface to PSI-MI 2.5 files

A class representing interaction data parsed from PSI-MI 2.5 XML files

Objects can be created by calls of the form parsePsimi25Interaction

organismName:: Object of class "character", the unique organism name(s) of the interactors
taxId:: Object of class "character", the unique NCBI taxonomy ID(s) of the interactors
releaseDate:: Object of class "character", character, release date of the data entry, recorded in the entry element of the XML file
interactors:: Object of class "list", a list of psimi25Interactor-class objects, each represents one interactor.
interactions:: Object of class "list", list, a list of psimi25Interaction-class objects, each represents one interaction.

interactions: signature(x = "psimi25InteractionEntry"): return a list of psimi25Intearaction objects, each representing one interaction
interactors: signature(x = "psimi25InteractionEntry"): a method to find all the interactors within the psimi25InteractionEntry and print them
organismName: signature(x = "psimi25InteractionEntry"): returns organism names of the interactors
releaseDate: signature(x = "psimi25InteractionEntry"): returns the release date, serving as a proxy for versioning
show: signature(object = "psimi25InteractionEntry"): a print method
taxId: signature(x = "psimi25InteractionEntry"): returns NCBI taxonomy ID
numInteractors: signature(x = "psimi25InteractionEntry"): returns the number of interactors.
numInteractions: signature(x = "psimi25InteractionEntry"): returns the number of interactions.
pubmedID: signature(x = "psimi25InteractionEntry"): returns the (unique) PubMed IDs of the papers reporting the interactions in the entry.