translateID-methods: Translate interactors into other identifiers

Description Methods

Description

The method finds any annotation IDs of of psimi25Graph-class or psimi25Hypergraph-class or psimi25Interactor-class

Methods

r = "psimi25Graph"

An object of psimi25Graph-class. It replaces the nodes with translated IDs and returns a new psimi25Graph object back.

r = "psimi25Hypergraph"

An object of psimi25Hypergraph-class. Since the nodes of psimi25Hypergraph are not mutable, this method accepts a UniProt ID of interactors and returns the translated ID back. NA is also acceptable, which can be used to check interactors without mapping to UniProt

r = "list"

A list of psimi25Interactor-class, returns a vector of translated identifiers back

r = "psimi25Interactor"

An object of psimi25Interactor-class, returns translated identifier. Before using the method it is advisable to used xref(x) method to check which cross references are provided.


RpsiXML documentation built on Nov. 8, 2020, 6:02 p.m.