complexName: Accessor functions for complex
In RpsiXML: R interface to PSI-MI 2.5 files

Description Usage Arguments Details Value Author(s) See Also Examples

These functions are used to extract useful information of complex in the form of psimi25Complex-class object.

1
2
3

complexName(x,...)
members(x)
attributesList(x)

`x`	An object of `psimi25Complex-class`
`...`	Not implemented yet

See examples

`complexName`	Returns the name of the complex in characters
`members`	A data frame of protein members building the complex and their information
`attributesList`	A list of `psimi25Attribute` objects, recording the attribute name, name accession and value.

Jitao David Zhang <jitao_david.zhang@roche.com>, Tony Chiang <tchiang@ebi.ac.uk>

psimi25Complex-class

xmlDir <- system.file("/extdata/psi25files",package="RpsiXML")

intactComplexxml <- file.path(xmlDir,"intact_complexSample.xml")
intactComplexSet <- parsePsimi25Complex(intactComplexxml, INTACT.PSIMI25)
complexSample <- complexes(intactComplexSet)[[2]]

complexName(complexSample)
attributesList(complexSample)
members(complexSample)