selex.mmSummary: Summarize Markov model properties

In SELEX: Functions for analyzing SELEX-seq data

Description

This function returns sample, order, Markov model type, R^2 value, cross validation sample/length, and applied filters for either all computed Markov models or a specified sample in the current working directory.

Usage

selex.mmSummary(sample=NULL, displayFilter=FALSE)

Arguments

sample	A sample handle to the sample for which Markov model information should be returned.
displayFilter	Display all applied sequence filter attributes.

Value

selex.mmSummary returns a data frame containing the sample, order, Markov model type, R^2 value, cross validation sample/length, and applied filters for all computed Markov models in the current working directory. If sample is provided, the above information is given for the specific sample only.

See Also

selex.mm, selex.summary

Examples

selex.mmSummary()

SELEX documentation built on Nov. 8, 2020, 5:22 p.m.