filter.label: Filter the label of a SIMACAT object

Description Usage Arguments Details Value Examples

View source: R/siamcat_class_helper_functions.R

Description

This functions filters the label in a SIAMCAT object

Usage

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filter.label(siamcat, ids, verbose = 1)

Arguments

siamcat

an object of class siamcat-class

ids

vector, can contain either names or indices of samples to be retained

verbose

integer, control output: 0 for no output at all, 1 for only information about progress and success, 2 for normal level of information and 3 for full debug information, defaults to 1

Details

This function filters the label contained in a SIAMCAT object, based on the provided ids. The IDs can be either sample names or indices to be retained.

Predominantly for internal use...

Please note: It makes sense to run validate.data after filtering the label.

Value

siamcat an object of class siamcat-class

Examples

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data(siamcat_example)

# simple working example
siamcat_filtered <- filter.label(siamcat_example, ids=c(1:20))

SIAMCAT documentation built on Nov. 8, 2020, 5:14 p.m.