Man pages for SNPchip
Visualizations for copy number alterations
| arrangeFigs | Arranging two trellis objects on a grid. |
| arrangeSideBySide | Helper function to arrange two trellis objects side by side... |
| centromere | Coordinates of centromere |
| dataFrame | Generic function for coercing gSet objects to data.frame |
| dataFrame-methods | Construct a data.frame from genomic data for plotting |
| defunct | SNPchip Deprecated |
| getCytoband | getCytoband |
| latticeFigs | Generate trellis objects of log R ratios and B allele... |
| plotIdiogram | Plots idiogram for one chromosome |
| xypanel | A panel function for plotting copy number versus physical... |
| xypanelBaf | Panel function for plotting copy number and B allele... |
| xyplot | Plot copy number and physical position for a set of genomic... |
| xyplotLrrBaf | xyplot lattice function for RangedData and oligoSnpSet... |
