Files in SemDist

Information Accretion-based Function Predictor Evaluation

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

data/Term_Count_anopheles_CC.rda

data/Parent_Count_ecolik12_CC.rda

data/Parent_Count_xenopus_BP.rda

data/Info_Accretion_rat_CC.rda

data/Info_Accretion_mouse_CC.rda

data/Info_Accretion_fly_CC.rda

data/Info_Accretion_zebrafish_BP.rda

data/Term_Count_pig_BP.rda

data/Term_Count_mouse_MF.rda

data/Term_Count_zebrafish_MF.rda

data/Term_Count_anopheles_MF.rda

data/Info_Accretion_malaria_CC.rda

data/Info_Accretion_ecolik12_CC.rda

data/Term_Count_canine_MF.rda

data/Parent_Count_canine_MF.rda

data/Term_Count_chimp_CC.rda

data/Info_Accretion_ecolik12_BP.rda

data/Term_Count_zebrafish_CC.rda

data/Parent_Count_worm_MF.rda

data/Term_Count_fly_BP.rda

data/Parent_Count_rhesus_CC.rda

data/Info_Accretion_anopheles_MF.rda

data/Parent_Count_mouse_BP.rda

data/Term_Count_chimp_MF.rda

data/Term_Count_ecolik12_MF.rda

data/Term_Count_ecolik12_CC.rda

data/Info_Accretion_canine_CC.rda

data/Info_Accretion_chicken_BP.rda

data/Term_Count_chicken_CC.rda

data/Parent_Count_anopheles_MF.rda

data/Info_Accretion_rhesus_BP.rda

data/Info_Accretion_pig_CC.rda

data/Parent_Count_mouse_CC.rda

data/Term_Count_pig_CC.rda

data/Parent_Count_pig_BP.rda

data/Parent_Count_canine_CC.rda

data/Term_Count_yeast_BP.rda

data/Parent_Count_malaria_BP.rda

data/Term_Count_canine_BP.rda

data/Info_Accretion_chimp_MF.rda

data/Term_Count_bovine_CC.rda

data/Info_Accretion_pig_MF.rda

data/Parent_Count_worm_CC.rda

data/Info_Accretion_zebrafish_CC.rda

data/Parent_Count_rat_MF.rda

data/Parent_Count_chicken_CC.rda

data/Info_Accretion_chimp_BP.rda

data/Term_Count_worm_BP.rda

data/Parent_Count_malaria_CC.rda

data/Parent_Count_zebrafish_BP.rda

data/Parent_Count_rhesus_BP.rda

data/Info_Accretion_bovine_CC.rda

data/Term_Count_fly_MF.rda

data/Info_Accretion_bovine_BP.rda

data/Info_Accretion_canine_BP.rda

data/Info_Accretion_rat_BP.rda

data/Term_Count_yeast_CC.rda

data/Parent_Count_pig_CC.rda

data/Parent_Count_fly_CC.rda

data/Term_Count_malaria_CC.rda

data/Parent_Count_malaria_MF.rda

data/Info_Accretion_chicken_CC.rda

data/Term_Count_bovine_BP.rda

data/Parent_Count_ecolik12_BP.rda

data/Parent_Count_rhesus_MF.rda

data/Parent_Count_anopheles_BP.rda

data/Info_Accretion_yeast_BP.rda

data/Term_Count_xenopus_MF.rda

data/Parent_Count_bovine_BP.rda

data/Info_Accretion_anopheles_BP.rda

data/Info_Accretion_rhesus_MF.rda

data/Term_Count_human_MF.rda

data/datalist

data/Term_Count_worm_CC.rda

data/Term_Count_arabidopsis_BP.rda

data/Parent_Count_fly_BP.rda

data/Info_Accretion_ecolik12_MF.rda

data/Info_Accretion_arabidopsis_BP.rda

data/Parent_Count_xenopus_MF.rda

data/Term_Count_xenopus_CC.rda

data/Info_Accretion_xenopus_CC.rda

data/Parent_Count_fly_MF.rda

data/Parent_Count_bovine_MF.rda

data/Info_Accretion_mouse_BP.rda

data/Parent_Count_chicken_MF.rda

data/Parent_Count_yeast_MF.rda

data/Parent_Count_canine_BP.rda

data/Info_Accretion_worm_BP.rda

data/Parent_Count_chimp_BP.rda

data/Parent_Count_chimp_MF.rda

data/Info_Accretion_arabidopsis_MF.rda

data/Info_Accretion_bovine_MF.rda

data/Info_Accretion_human_MF.rda

data/Info_Accretion_rhesus_CC.rda

data/Info_Accretion_xenopus_BP.rda

data/Info_Accretion_anopheles_CC.rda

data/Term_Count_rat_CC.rda

data/Term_Count_arabidopsis_MF.rda

data/Parent_Count_mouse_MF.rda

data/Info_Accretion_human_CC.rda

data/Info_Accretion_pig_BP.rda

data/Term_Count_xenopus_BP.rda

data/Term_Count_pig_MF.rda

data/Term_Count_chicken_MF.rda

data/Parent_Count_rat_BP.rda

data/Parent_Count_worm_BP.rda

data/Term_Count_anopheles_BP.rda

data/Parent_Count_yeast_BP.rda

data/Term_Count_ecolik12_BP.rda

data/Info_Accretion_xenopus_MF.rda

data/Info_Accretion_mouse_MF.rda

data/Parent_Count_arabidopsis_BP.rda

data/Term_Count_rhesus_CC.rda

data/Term_Count_worm_MF.rda

data/Info_Accretion_malaria_MF.rda

data/Term_Count_canine_CC.rda

data/Parent_Count_zebrafish_CC.rda

data/Info_Accretion_yeast_MF.rda

data/Term_Count_mouse_BP.rda

data/Info_Accretion_canine_MF.rda

data/Parent_Count_yeast_CC.rda

data/Parent_Count_chimp_CC.rda

data/Term_Count_human_CC.rda

data/Parent_Count_anopheles_CC.rda

data/Parent_Count_xenopus_CC.rda

data/Parent_Count_bovine_CC.rda

data/Term_Count_rhesus_BP.rda

data/Info_Accretion_malaria_BP.rda

data/Info_Accretion_yeast_CC.rda

data/Info_Accretion_worm_CC.rda

data/Term_Count_chicken_BP.rda

data/Parent_Count_rat_CC.rda

data/Term_Count_zebrafish_BP.rda

data/Info_Accretion_human_BP.rda

data/Term_Count_rhesus_MF.rda

data/Parent_Count_ecolik12_MF.rda

data/Parent_Count_arabidopsis_MF.rda

data/Info_Accretion_fly_MF.rda

data/Term_Count_arabidopsis_CC.rda

data/Term_Count_rat_BP.rda

data/Parent_Count_zebrafish_MF.rda

data/Info_Accretion_rat_MF.rda

data/Term_Count_bovine_MF.rda

data/Info_Accretion_worm_MF.rda

data/Term_Count_fly_CC.rda

data/Term_Count_mouse_CC.rda

data/Parent_Count_human_CC.rda

data/Parent_Count_human_MF.rda

data/Term_Count_yeast_MF.rda

data/Term_Count_rat_MF.rda

data/Term_Count_malaria_MF.rda

data/Info_Accretion_fly_BP.rda

data/Parent_Count_human_BP.rda

data/Info_Accretion_chicken_MF.rda

data/Parent_Count_pig_MF.rda

data/Info_Accretion_zebrafish_MF.rda

data/Term_Count_chimp_BP.rda

data/Term_Count_malaria_BP.rda

data/Info_Accretion_chimp_CC.rda

data/Parent_Count_arabidopsis_CC.rda

data/Info_Accretion_arabidopsis_CC.rda

data/Parent_Count_chicken_BP.rda

data/Term_Count_human_BP.rda

R/computeIA.R R/utilities.R R/gene2GO.R R/findRuMi.R

vignettes/introduction.rnw

vignettes/refdbshort.bib

man/termcnt.Rd man/parentcnt.Rd man/findRUMI.Rd man/RUMIcurve.Rd man/computeIA.Rd man/IAccr.Rd

inst/NEWS.Rd

inst/doc/introduction.R

inst/doc/introduction.rnw

inst/doc/introduction.pdf

inst/extdata/MFO_LABELS_TEST.txt

inst/extdata/mfo_ontology.txt

inst/extdata/myIA.rda

inst/extdata/MFO_PREDS_TEST.txt

SemDist documentation built on Nov. 8, 2020, 8:27 p.m.