TBSignatureProfiler: Profile RA-Seq Data Using TB Pathway Signatures

Signatures of TB progression, TB disease, and other TB disease states have been created. This package makes it easy to profile RNA-Seq data using these signatures and common signature profiling tools including ASSIGN, GSVA, and ssGSEA.

Package details

AuthorDavid Jenkins [aut, cre], Yue Zhao [aut], W. Evan Johnson [aut], Aubrey Odom [aut], Christian Love [aut]
Bioconductor views DifferentialExpression GeneExpression
MaintainerDavid Jenkins <dfj@bu.edu>
LicenseMIT + file LICENSE
URL https://github.com/compbiomed/TBSignatureProfiler
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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TBSignatureProfiler documentation built on Nov. 8, 2020, 6:56 p.m.