deseq2_norm_rle: Normalize gene expression count data.
In TBSignatureProfiler: Profile RA-Seq Data Using TB Pathway Signatures
Description
Usage
Arguments
Value
Examples
Description
Normalize gene expression count data.
Usage
1
deseq2_norm_rle(inputData)
Arguments
inputData
a data.frame or matrix of gene expression
count data. Required.
Value
A data.frame or matrix of normalized count data.
Examples
1
2
3
## Example using the counts assay from a SummarizedExperiment
data_in <- SummarizedExperiment::assay(TB_indian, "counts")
res <- deseq2_norm_rle(data_in)
TBSignatureProfiler documentation built on Nov. 8, 2020, 6:56 p.m.
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Description Usage Arguments Value Examples
Description
Normalize gene expression count data.
Usage
1 | deseq2_norm_rle(inputData)
|
Arguments
inputData |
a |
Value
A data.frame or matrix of normalized count data.
Examples
1 2 3 | ## Example using the counts assay from a SummarizedExperiment
data_in <- SummarizedExperiment::assay(TB_indian, "counts")
res <- deseq2_norm_rle(data_in)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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